LOC_Os07g39480.1 (AtWRKY20, WRKY20,...)

Aliases : AtWRKY20, WRKY20, LOC_Os07g39480

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g39480.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00208940	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
Adi_g052345	WRKY26	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058352	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12756.t1	WRKY8, ATWRKY8,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene41969.t2	AtWRKY20,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g15071	ATWRKY58, WRKY58	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g38597	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.12G025600.1	AtWRKY20,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.13G001000.1	WRKY3, Ceric.13G001000	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g29056	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g01492	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01037775001	AtWRKY20, WRKY20	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_32055	AtWRKY20, WRKY20	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
Gb_36184	WRKY3	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Lfl_g05639	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Mp1g08890.1	WRKY44, TTG2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Ore_g09401	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g16460	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g18284	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002796	WRKY4	WRKY-type transcription factor & original description: CDS=1-1740	0.03	OrthoFinder output from all 47 species
Solyc07g066220.3.1	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Spa_g30009	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e010647_P001	AtWRKY20,...	transcription factor (WRKY)	0.07	OrthoFinder output from all 47 species
Zm00001e022143_P002	WRKY4, Zm00001e022143	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Zm00001e035385_P002	AtWRKY20,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	236	292
IPR003657	WRKY_dom	410	467

External Links

No external refs found!

LOC_Os07g39480.1 (AtWRKY20, WRKY20,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation