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  5. LOC_Os07g38850.1

LOC_Os07g38850.1 (HST, ATHST, PDS2,...)


Aliases : HST, ATHST, PDS2, LOC_Os07g38850

Description : Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza sativa subsp. japonica (sp|q0d576|hpt2_orysj : 533.0)


Gene families : OG0004743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g38850.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g018308 HST, ATHST, PDS2 homogentisate solanesyltransferase *(HST) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.31 HST, ATHST, PDS2 Homogentisate solanesyltransferase, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dde_g02814 HST, ATHST, PDS2 homogentisate solanesyltransferase *(HST) & original... 0.01 OrthoFinder output from all 47 species
Mp2g15430.1 HST, ATHST, PDS2 homogentisate solanesyltransferase (HST) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000537 UbiA_prenyltransferase 173 315
No external refs found!