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  5. LOC_Os07g30800.1

LOC_Os07g30800.1 (LOC_Os07g30800)


Aliases : LOC_Os07g30800

Description : Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana (sp|q0wrj7|fk202_arath : 174.0)


Gene families : OG0006552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g30800.1

Target Alias Description ECC score Gene Family Method Actions
AT3G60370 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.03 OrthoFinder output from all 47 species
Aev_g04542 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.02 OrthoFinder output from all 47 species
Ala_g26819 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.02 OrthoFinder output from all 47 species
Als_g07930 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.02 OrthoFinder output from all 47 species
Aob_g04966 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.03 OrthoFinder output from all 47 species
Aop_g48269 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.02 OrthoFinder output from all 47 species
Cba_g13607 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.03 OrthoFinder output from all 47 species
Ceric.18G005700.1 Ceric.18G005700 peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.06 OrthoFinder output from all 47 species
Cre13.g577850 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g00546 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.03 OrthoFinder output from all 47 species
Dcu_g41126 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.03 OrthoFinder output from all 47 species
Ehy_g04468 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01018250001 No alias Protein modification.protein folding and quality... 0.09 OrthoFinder output from all 47 species
Gb_04437 No alias protein folding catalyst (FKBP) 0.08 OrthoFinder output from all 47 species
Lfl_g00886 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.03 OrthoFinder output from all 47 species
MA_10434044g0010 No alias protein folding catalyst (FKBP) 0.05 OrthoFinder output from all 47 species
MA_170550g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g09550.1 No alias protein folding catalyst (FKBP) 0.02 OrthoFinder output from all 47 species
Mp7g09560.1 No alias protein folding catalyst (FKBP) 0.02 OrthoFinder output from all 47 species
Nbi_g09543 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.06 OrthoFinder output from all 47 species
Ore_g28126 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.02 OrthoFinder output from all 47 species
Sam_g19092 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.02 OrthoFinder output from all 47 species
Solyc10g039270.2.1 Solyc10g039270 protein folding catalyst (FKBP) 0.09 OrthoFinder output from all 47 species
Spa_g05598 No alias peptidyl-prolyl cis-trans isomerase *(FKBP20-2) &... 0.04 OrthoFinder output from all 47 species
Zm00001e035006_P002 Zm00001e035006 Peptidyl-prolyl cis-trans isomerase FKBP20-2,... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006450 regulation of translational fidelity IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 151 194
No external refs found!