LOC_Os06g40940.1 (AtGLDP1, GLDP1, LOC_Os06g40940)

Aliases : AtGLDP1, GLDP1, LOC_Os06g40940

Description : glycine dehydrogenase component P-protein of glycine cleavage system

Gene families : OG0002489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002489_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g40940.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00064p00096040	AtGLDP1, GLDP1,...	Photosynthesis.photorespiration.glycine cleavage...	0.05	OrthoFinder output from all 47 species
AT2G26080	AtGLDP2, GLDP2	glycine decarboxylase P-protein 2	0.04	OrthoFinder output from all 47 species
AT4G33010	AtGLDP1, GLDP1	glycine decarboxylase P-protein 1	0.07	OrthoFinder output from all 47 species
Adi_g012349	AtGLDP1, GLDP1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Aev_g01550	AtGLDP1, GLDP1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.05	OrthoFinder output from all 47 species
Ala_g02610	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.04	OrthoFinder output from all 47 species
Als_g16072	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.05	OrthoFinder output from all 47 species
Aob_g17674	AtGLDP1, GLDP1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species
Aop_g08292	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.1	OrthoFinder output from all 47 species
Cba_g17607	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.09	OrthoFinder output from all 47 species
Ceric.33G048300.1	AtGLDP2, GLDP2,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species
Cre12.g534800	AtGLDP2, GLDP2	Photosynthesis.photorespiration.glycine cleavage...	0.03	OrthoFinder output from all 47 species
Dac_g14111	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Dcu_g04092	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.06	OrthoFinder output from all 47 species
Dde_g07446	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.06	OrthoFinder output from all 47 species
Ehy_g07919	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.04	OrthoFinder output from all 47 species
GSVIVT01035408001	AtGLDP1, GLDP1	Photosynthesis.photorespiration.glycine cleavage...	0.09	OrthoFinder output from all 47 species
Gb_03208	AtGLDP1, GLDP1	glycine dehydrogenase component P-protein of glycine...	0.04	OrthoFinder output from all 47 species
Len_g15281	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species
Lfl_g04276	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Mp7g08890.1	AtGLDP2, GLDP2	glycine dehydrogenase component P-protein of glycine...	0.04	OrthoFinder output from all 47 species
Msp_g04527	AtGLDP1, GLDP1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.11	OrthoFinder output from all 47 species
Msp_g15762	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.09	OrthoFinder output from all 47 species
Msp_g17685	AtGLDP2, GLDP2	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Nbi_g08001	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Ore_g36296	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species
Pir_g12246	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Pnu_g20862	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.04	OrthoFinder output from all 47 species
Pp3c13_14900V3.1	Pp3c13_14900	glycine decarboxylase P-protein 1	0.01	OrthoFinder output from all 47 species
Ppi_g32656	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Sam_g11216	No alias	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Sam_g35198	No alias	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Smo153563	AtGLDP2, GLDP2	Photosynthesis.photorespiration.glycine cleavage...	0.03	OrthoFinder output from all 47 species
Solyc08g065220.3.1	AtGLDP1, GLDP1,...	glycine dehydrogenase component P-protein of glycine...	0.14	OrthoFinder output from all 47 species
Spa_g26855	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species
Spa_g56685	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species
Tin_g04178	AtGLDP2, GLDP2	EC_1.4 oxidoreductase acTing on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004375	glycine dehydrogenase (decarboxylating) activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006544	glycine metabolic process	None	Extended
BP	GO:0006546	glycine catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009063	amino acid catabolic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009071	serine family amino acid catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	None	Extended
MF	GO:0016642	oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901606	alpha-amino acid catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004096	catalase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
CC	GO:0005779	obsolete integral component of peroxisomal membrane	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016559	peroxisome fission	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020581	GDC_P	516	793
IPR020581	GDC_P	73	500

External Links

No external refs found!

LOC_Os06g40940.1 (AtGLDP1, GLDP1, LOC_Os06g40940)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation