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  5. LOC_Os06g36700.1

LOC_Os06g36700.1 (LOC_Os06g36700)


Aliases : LOC_Os06g36700

Description : CCT5 subunit epsilon of CCT chaperonin folding complex


Gene families : OG0005131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g36700.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00173980 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 OrthoFinder output from all 47 species
AT1G24510 No alias TCP-1/cpn60 chaperonin family protein 0.17 OrthoFinder output from all 47 species
Adi_g011435 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Aev_g12956 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
Ala_g06734 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Als_g14768 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Aop_g02559 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.04 OrthoFinder output from all 47 species
Azfi_s0390.g067696 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.04 OrthoFinder output from all 47 species
Ceric.01G032800.1 Ceric.01G032800 subunit epsilon *(CCT5) of CCT chaperonin folding... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000571.47 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Cre03.g156750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
Dac_g03337 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.04 OrthoFinder output from all 47 species
Dcu_g05555 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.06 OrthoFinder output from all 47 species
Dde_g03862 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
GSVIVT01000590001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
GSVIVT01020856001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.1 OrthoFinder output from all 47 species
Gb_40545 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Len_g15605 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Lfl_g19360 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
MA_10435597g0010 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.1 OrthoFinder output from all 47 species
Mp7g17510.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Ore_g09320 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Pp3c20_23570V3.1 Pp3c20_23570 TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
Smo158694 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 OrthoFinder output from all 47 species
Solyc05g013990.3.1 Solyc05g013990 CCT5 subunit epsilon of CCT chaperonin folding complex 0.17 OrthoFinder output from all 47 species
Spa_g12182 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.06 OrthoFinder output from all 47 species
Spa_g21117 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
Tin_g01058 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.04 OrthoFinder output from all 47 species
Zm00001e011557_P001 Zm00001e011557 CCT5 subunit epsilon of CCT chaperonin folding complex 0.21 OrthoFinder output from all 47 species
Zm00001e032727_P001 Zm00001e032727 CCT5 subunit epsilon of CCT chaperonin folding complex 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 40 531
No external refs found!