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  5. LOC_Os06g23160.1

LOC_Os06g23160.1 (LOC_Os06g23160)


Aliases : LOC_Os06g23160

Description : component eIF2B-gamma of eIF2B eIF2-GDP recycling complex


Gene families : OG0004203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g23160.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00117720 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Als_g61558 No alias component *(eIF2B-gamma) of eIF2B eIF2-GDP recycling... 0.03 OrthoFinder output from all 47 species
Aop_g03484 No alias component *(eIF2B-gamma) of eIF2B eIF2-GDP recycling... 0.02 OrthoFinder output from all 47 species
Cba_g15157 No alias component *(eIF2B-gamma) of eIF2B eIF2-GDP recycling... 0.02 OrthoFinder output from all 47 species
Ceric.25G019700.1 Ceric.25G019700 component *(eIF2B-gamma) of eIF2B eIF2-GDP recycling... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020912.99 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Cre03.g207825 No alias Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
Lfl_g01387 No alias component *(eIF2B-gamma) of eIF2B eIF2-GDP recycling... 0.03 OrthoFinder output from all 47 species
Mp4g14360.1 No alias component eIF2B-gamma of eIF2B eIF2-GDP recycling complex 0.02 OrthoFinder output from all 47 species
Solyc11g072090.2.1 Solyc11g072090 component eIF2B-gamma of eIF2B eIF2-GDP recycling complex 0.03 OrthoFinder output from all 47 species
Zm00001e005127_P001 Zm00001e005127 component eIF2B-gamma of eIF2B eIF2-GDP recycling complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005835 NTP_transferase_dom 6 143
IPR001451 Hexapep 378 411
No external refs found!