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  5. LOC_Os06g13050.1

LOC_Os06g13050.1 (LOC_Os06g13050)


Aliases : LOC_Os06g13050

Description : Peroxidase 65 OS=Arabidopsis thaliana (sp|q9fjr1|per65_arath : 289.0)


Gene families : OG0006225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g13050.1

Target Alias Description ECC score Gene Family Method Actions
AT1G10510 emb2004 RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g059435 emb2004 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g13013 emb2004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06644 emb2004 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15959 emb2004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G006400.1 emb2004, Ceric.29G006400 not classified & original description: pacid=50625910... 0.04 OrthoFinder output from all 47 species
GSVIVT01020179001 emb2004 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_17994 emb2004 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g04112 emb2004 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp4g21830.1 emb2004 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g05987 emb2004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14237 emb2004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53011 emb2004 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g006170.4.1 emb2004, Solyc05g006170 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e036062_P001 emb2004, Zm00001e036062 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006979 response to oxidative stress IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 518 539
IPR001611 Leu-rich_rpt 743 766
IPR001611 Leu-rich_rpt 575 597
IPR001611 Leu-rich_rpt 497 513
IPR001611 Leu-rich_rpt 688 710
IPR001611 Leu-rich_rpt 659 682
IPR001611 Leu-rich_rpt 440 456
IPR001611 Leu-rich_rpt 773 795
IPR001611 Leu-rich_rpt 463 485
IPR001611 Leu-rich_rpt 638 654
IPR002016 Haem_peroxidase 46 286
No external refs found!