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  5. LOC_Os06g01210.1

LOC_Os06g01210.1 (DRT112, PETE2, LOC_Os06g01210)


Aliases : DRT112, PETE2, LOC_Os06g01210

Description : plastocyanin electron carrier


Gene families : OG0003193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g01210.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00142570 DRT112, PETE2,... Photosynthesis.photophosphorylation.Cytb6/f to PS-I... 0.22 OrthoFinder output from all 47 species
AT1G20340 DRT112, PETE2 Cupredoxin superfamily protein 0.24 OrthoFinder output from all 47 species
AT1G76100 PETE1 plastocyanin 1 0.23 OrthoFinder output from all 47 species
Als_g00392 PETE1 plastocyanin electron carrier & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g39621 PETE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20641 DRT112, PETE2 plastocyanin electron carrier & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21661 PETE1 plastocyanin electron carrier & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13279.t1 PETE1, Aspi01Gene13279 plastocyanin electron carrier & original description: none 0.02 OrthoFinder output from all 47 species
Cre03.g182551 PETE1 Photosynthesis.photophosphorylation.Cytb6/f to PS-I... 0.18 OrthoFinder output from all 47 species
Dcu_g31002 DRT112, PETE2 plastocyanin electron carrier & original description: none 0.22 OrthoFinder output from all 47 species
GSVIVT01008733001 No alias Photosynthesis.photophosphorylation.Cytb6/f to PS-I... 0.17 OrthoFinder output from all 47 species
Gb_27876 DRT112, PETE2 plastocyanin electron carrier 0.1 OrthoFinder output from all 47 species
Lfl_g16362 DRT112, PETE2 plastocyanin electron carrier & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427889g0020 DRT112, PETE2 plastocyanin electron carrier 0.08 OrthoFinder output from all 47 species
Mp4g02720.1 No alias plastocyanin electron carrier 0.21 OrthoFinder output from all 47 species
Ore_g26025 DRT112, PETE2 plastocyanin electron carrier & original description: none 0.15 OrthoFinder output from all 47 species
Ore_g38506 PETE1 plastocyanin electron carrier & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g31345 PETE1 plastocyanin electron carrier & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c21_4230V3.1 DRT112, PETE2,... plastocyanin 1 0.13 OrthoFinder output from all 47 species
Ppi_g06676 DRT112, PETE2 plastocyanin electron carrier & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g20348 PETE1 plastocyanin electron carrier & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54652 DRT112, PETE2 plastocyanin electron carrier & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007095 DRT112, PETE2 plastocyanin electron carrier & original description: CDS=1-504 0.06 OrthoFinder output from all 47 species
Smo167855 DRT112, PETE2 Photosynthesis.photophosphorylation.Cytb6/f to PS-I... 0.06 OrthoFinder output from all 47 species
Solyc04g082010.1.1 DRT112, PETE2,... plastocyanin electron carrier 0.11 OrthoFinder output from all 47 species
Zm00001e029782_P001 DRT112, PETE2,... plastocyanin electron carrier 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000923 BlueCu_1 59 154
No external refs found!