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  5. LOC_Os05g33280.1

LOC_Os05g33280.1 (TLP18.3, LOC_Os05g33280)


Aliases : TLP18.3, LOC_Os05g33280

Description : Psb32 protein involved in PS-II assembly


Gene families : OG0007030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g33280.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00126870 TLP18.3,... Photosynthesis.photophosphorylation.photosystem... 0.2 OrthoFinder output from all 47 species
AT1G54780 TLP18.3 thylakoid lumen 18.3 kDa protein 0.17 OrthoFinder output from all 47 species
Adi_g001945 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.15 OrthoFinder output from all 47 species
Aev_g07030 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.09 OrthoFinder output from all 47 species
Ala_g01414 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.09 OrthoFinder output from all 47 species
Als_g32115 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.11 OrthoFinder output from all 47 species
Aob_g07689 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.05 OrthoFinder output from all 47 species
Aop_g08442 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.14 OrthoFinder output from all 47 species
Aspi01Gene13421.t1 TLP18.3, Aspi01Gene13421 protein involved in PS-II assembly *(Psb32) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033664 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.06 OrthoFinder output from all 47 species
Cba_g08697 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.09 OrthoFinder output from all 47 species
Ceric.05G027600.1 TLP18.3, Ceric.05G027600 protein involved in PS-II assembly *(Psb32) & original... 0.12 OrthoFinder output from all 47 species
Cre03.g182150 TLP18.3 Photosynthesis.photophosphorylation.photosystem... 0.15 OrthoFinder output from all 47 species
Dac_g09996 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.11 OrthoFinder output from all 47 species
Dcu_g00821 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.12 OrthoFinder output from all 47 species
Ehy_g06594 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.1 OrthoFinder output from all 47 species
GSVIVT01000004001 TLP18.3 Photosynthesis.photophosphorylation.photosystem... 0.1 OrthoFinder output from all 47 species
Len_g16675 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.19 OrthoFinder output from all 47 species
Lfl_g03752 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.08 OrthoFinder output from all 47 species
MA_10433010g0010 TLP18.3 Psb32 protein involved in PS-II assembly 0.09 OrthoFinder output from all 47 species
Mp8g16080.1 TLP18.3 Psb32 protein involved in PS-II assembly 0.21 OrthoFinder output from all 47 species
Msp_g03092 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.11 OrthoFinder output from all 47 species
Nbi_g17006 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.1 OrthoFinder output from all 47 species
Pir_g00411 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.1 OrthoFinder output from all 47 species
Pnu_g12645 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.08 OrthoFinder output from all 47 species
Pp3c11_19220V3.1 TLP18.3, Pp3c11_19220 thylakoid lumen 18.3 kDa protein 0.04 OrthoFinder output from all 47 species
Ppi_g17567 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007460 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.08 OrthoFinder output from all 47 species
Sam_g08275 No alias protein involved in PS-II assembly *(Psb32) & original... 0.1 OrthoFinder output from all 47 species
Smo127459 TLP18.3 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Solyc01g098640.3.1 TLP18.3, Solyc01g098640 Psb32 protein involved in PS-II assembly 0.19 OrthoFinder output from all 47 species
Spa_g05586 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.12 OrthoFinder output from all 47 species
Spa_g05587 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.17 OrthoFinder output from all 47 species
Tin_g07118 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.13 OrthoFinder output from all 47 species
Zm00001e026820_P001 TLP18.3, Zm00001e026820 Psb32 protein involved in PS-II assembly 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR007621 TPM_dom 176 300
No external refs found!