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  5. LOC_Os05g28940.1

LOC_Os05g28940.1 (LOC_Os05g28940)


Aliases : LOC_Os05g28940

Description : Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana (sp|q9cai1|drg2_arath : 729.0)


Gene families : OG0001761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g28940.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00071330 evm_27.TU.AmTr_v1... Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aspi01Gene29876.t1 Aspi01Gene29876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G065500.1 Ceric.24G065500 not classified & original description: pacid=50629763... 0.03 OrthoFinder output from all 47 species
Cre01.g058886 No alias Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre06.g252450 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g02761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43722 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_115530g0010 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Sam_g49852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e039094_P001 Zm00001e039094 Developmentally-regulated G-protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR031662 GTP-binding_2 184 289
IPR006073 GTP-bd 64 179
IPR004095 TGS 290 366
No external refs found!