1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g11780.1

LOC_Os05g11780.1 (LOC_Os05g11780)


Aliases : LOC_Os05g11780

Description : mitochondrial dicarboxylate transporter. solute transporter (MTCC)


Gene families : OG0003366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003366_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g11780.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00085860 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species
AT5G19760 No alias Mitochondrial substrate carrier family protein 0.07 OrthoFinder output from all 47 species
Als_g03041 No alias solute transporter *(MTCC) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05089 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0062.g035218 No alias solute transporter *(MTCC) & original description: CDS=270-1211 0.03 OrthoFinder output from all 47 species
Ceric.15G061500.1 Ceric.15G061500 solute transporter *(MTCC) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.31 No alias Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species
Cre16.g672650 No alias Solute transport.carrier-mediated transport.MC-type... 0.05 OrthoFinder output from all 47 species
Lfl_g17803 No alias solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g16790.1 No alias mitochondrial dicarboxylate transporter. solute... 0.03 OrthoFinder output from all 47 species
Nbi_g08750 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005620.3.1 Solyc01g005620 mitochondrial dicarboxylate transporter. solute... 0.04 OrthoFinder output from all 47 species
Zm00001e031254_P006 Zm00001e031254 mitochondrial dicarboxylate transporter. solute... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 22 100
IPR018108 Mitochondrial_sb/sol_carrier 110 205
IPR018108 Mitochondrial_sb/sol_carrier 216 300
No external refs found!