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  5. LOC_Os04g55500.1

LOC_Os04g55500.1 (ATEME1B, EME1B, LOC_Os04g55500)


Aliases : ATEME1B, EME1B, LOC_Os04g55500

Description : component EME1 of MUS81-EME1 Holliday junction cleavage heterodimer


Gene families : OG0007266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55500.1

Target Alias Description ECC score Gene Family Method Actions
Zm00001e006755_P001 ATEME1B, EME1B,... component EME1 of MUS81-EME1 Holliday junction cleavage... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR006166 ERCC4_domain 361 518
No external refs found!