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  5. LOC_Os04g38620.1

LOC_Os04g38620.1 (NRP2, LOC_Os04g38620)


Aliases : NRP2, LOC_Os04g38620

Description : histone chaperone (NRP)


Gene families : OG0001637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g38620.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT1G18800 NRP2 NAP1-related protein 2 0.04 OrthoFinder output from all 47 species
AT1G74560 NRP1 NAP1-related protein 1 0.08 OrthoFinder output from all 47 species
Adi_g115339 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008382 NRP2 histone chaperone *(NRP) & original description: CDS=246-1052 0.03 OrthoFinder output from all 47 species
Ceric.15G055400.1 NRP2, Ceric.15G055400 histone chaperone *(NRP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g32489 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21089 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008022001 NRP2 NAP1-related protein 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_36879 NRP2 histone chaperone (NRP) 0.04 OrthoFinder output from all 47 species
Mp3g22840.1 NRP2 histone chaperone (NRP) 0.02 OrthoFinder output from all 47 species
Ore_g06864 NRP2 histone chaperone *(NRP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014360 NRP2 histone chaperone *(NRP) & original description: CDS=1-804 0.04 OrthoFinder output from all 47 species
Solyc03g116170.3.1 NRP2, Solyc03g116170 histone chaperone (NRP) 0.06 OrthoFinder output from all 47 species
Solyc06g069890.4.1 NRP2, Solyc06g069890 histone chaperone (NRP) 0.04 OrthoFinder output from all 47 species
Spa_g28979 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014912_P001 NRP2, Zm00001e014912 histone chaperone (NRP) 0.03 OrthoFinder output from all 47 species
Zm00001e022803_P001 NRP2, Zm00001e022803 histone chaperone (NRP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002164 NAP_family 28 73
IPR002164 NAP_family 73 221
No external refs found!