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  5. LOC_Os04g13150.1

LOC_Os04g13150.1 (LOC_Os04g13150)


Aliases : LOC_Os04g13150

Description : F-box/LRR-repeat protein 13 OS=Arabidopsis thaliana (sp|q9fwz1|fbl13_arath : 83.6)


Gene families : OG0005558 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005558_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g13150.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g41260.1 LOC_Os01g41260 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g41310.1 LOC_Os01g41310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR006566 FBD 417 458
IPR001810 F-box_dom 69 107
No external refs found!