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  5. LOC_Os03g53790.1

LOC_Os03g53790.1 (LOC_Os03g53790)


Aliases : LOC_Os03g53790

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 240.1) & Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia (sp|a5jtq3|xyl2_medsv : 152.0)


Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53790.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00130660 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00004p00131000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00127950 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.01 OrthoFinder output from all 47 species
AMTR_s00029p00215880 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AT3G47040 No alias Glycosyl hydrolase family protein 0.02 OrthoFinder output from all 47 species
AT3G47050 No alias Glycosyl hydrolase family protein 0.03 OrthoFinder output from all 47 species
AT3G62710 No alias Glycosyl hydrolase family protein 0.04 OrthoFinder output from all 47 species
Adi_g067004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37889 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19719 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45957 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46287 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47838 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01873 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g35160 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01818 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g65214 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59188.t1 Aspi01Gene59188 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1035.g095886 No alias EC_3.2 glycosylase & original description: CDS=217-2184 0.03 OrthoFinder output from all 47 species
Azfi_s1903.g107957 No alias EC_3.2 glycosylase & original description: CDS=887-1975 0.03 OrthoFinder output from all 47 species
Cba_g13685 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02846 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21660 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13162 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g28794 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07578 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012185001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species
GSVIVT01023452001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
GSVIVT01023455001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
GSVIVT01024793001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
GSVIVT01037543001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Gb_34627 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
LOC_Os02g03870.1 LOC_Os02g03870 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53800.3 LOC_Os03g53800 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53860.1 LOC_Os03g53860 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Len_g46571 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50821 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21009 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10437038g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Mp4g13480.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Msp_g36715 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02210 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13297 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29758 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22403 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42137 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_23400V3.1 Pp3c4_23400 Glycosyl hydrolase family protein 0.03 OrthoFinder output from all 47 species
Ppi_g15177 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15636 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002581 No alias EC_3.2 glycosylase & original description: CDS=223-2043 0.02 OrthoFinder output from all 47 species
Smo157260 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Smo74114 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Solyc04g015560.4.1 Solyc04g015560 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Solyc06g073750.4.1 Solyc06g073750 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Tin_g03456 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10661 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19085 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005676_P010 Zm00001e005676 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Zm00001e005678_P012 Zm00001e005678 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Zm00001e012036_P002 Zm00001e012036 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Zm00001e012037_P001 Zm00001e012037 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.06 OrthoFinder output from all 47 species
Zm00001e025311_P002 Zm00001e025311 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 59 388
IPR002772 Glyco_hydro_3_C 425 636
No external refs found!