LOC_Os03g53250.1 (LOC_Os03g53250)

Aliases : LOC_Os03g53250

Description : Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana (sp|q9cad5|yoda_arath : 86.3) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 56.3)

Gene families : OG0005696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005696_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g53250.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g059811	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.36G058100.1	Ceric.36G058100	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Dcu_g10524	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
GSVIVT01018052001	No alias	Mitogen-activated protein kinase kinase kinase YODA...	0.04	OrthoFinder output from all 47 species
Gb_34638	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Mp1g03380.1	No alias	Mitogen-activated protein kinase kinase kinase 1...	0.05	OrthoFinder output from all 47 species
Ore_g25708	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pir_g45322	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sam_g28149	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Solyc09g082800.3.1	Solyc09g082800	Serine/threonine-protein kinase STY13 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
Zm00001e005642_P002	Zm00001e005642	Enzyme classification.EC_2 transferases.EC_2.7...	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
CC	GO:0005779	obsolete integral component of peroxisomal membrane	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
CC	GO:0008023	transcription elongation factor complex	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
CC	GO:0016593	Cdc73/Paf1 complex	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	473	750

External Links

No external refs found!

LOC_Os03g53250.1 (LOC_Os03g53250)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation