LOC_Os03g53200.1 (ACAM-6, CAM6, LOC_Os03g53200)


Aliases : ACAM-6, CAM6, LOC_Os03g53200

Description : Calmodulin-like protein 4 OS=Oryza sativa subsp. japonica (sp|q84mn0|cml4_orysj : 248.0)


Gene families : OG0001195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001195_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53200.1

Target Alias Description ECC score Gene Family Method Actions
AT4G37010 CEN2 centrin 2 0.05 OrthoFinder output from all 47 species
Als_g05931 CEN2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g42645 CEN2 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00206 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0123.g048370 CEN2 calcium sensor *(CML) & original description: CDS=1-489 0.02 OrthoFinder output from all 47 species
Azfi_s0246.g060027 CEN2 calcium sensor *(CML) & original description: CDS=1-480 0.02 OrthoFinder output from all 47 species
Cre11.g468450 CEN2 RNA processing.messenger ribonucleoprotein particle... 0.01 OrthoFinder output from all 47 species
Dde_g24143 CEN2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00334 CEN2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26953 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28485 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13101 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012873_P001 CEN2, Zm00001e012873 DNA repair protein (CEN2). centrin component CEN of... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 12 71
IPR002048 EF_hand_dom 82 146
No external refs found!