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  5. LOC_Os03g43970.1

LOC_Os03g43970.1 (AAT1, CAT1, LOC_Os03g43970)


Aliases : AAT1, CAT1, LOC_Os03g43970

Description : cationic amino acid transporter (CAT)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g43970.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00166780 CAT7,... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AMTR_s00035p00052900 CAT5,... Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
AMTR_s00092p00050170 AAT1, CAT1,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AT4G21120 AAT1, CAT1 amino acid transporter 1 0.03 OrthoFinder output from all 47 species
AT5G04770 ATCAT6, CAT6 cationic amino acid transporter 6 0.02 OrthoFinder output from all 47 species
Adi_g022679 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Adi_g054487 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aev_g09519 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Aev_g45240 CAT5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20827 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Ala_g34198 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Als_g03085 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Als_g42144 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Als_g48263 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aob_g18840 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene15711.t1 CAT7, Aspi01Gene15711 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50451.t1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene52622.t1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0132.g049200 CAT7 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Ceric.02G098300.1 ATCAT6, CAT6,... cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G060500.1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G060700.1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
Ceric.08G046600.1 CAT7, Ceric.08G046600 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G017600.1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dac_g09146 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dac_g13010 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g01631 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08835 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g12855 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dde_g10920 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dde_g29119 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g09898 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01012155001 CAT5 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01021609001 AAT1, CAT1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Gb_27326 AAT1, CAT1 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Gb_27327 AAT1, CAT1 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Len_g03326 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
MA_10429855g0010 CAT7 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
MA_10433254g0020 AAT1, CAT1 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
MA_10433658g0010 ATCAT6, CAT6 Cationic amino acid transporter 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_453630g0010 AAT1, CAT1 cationic amino acid transporter (CAT) 0.08 OrthoFinder output from all 47 species
MA_470779g0010 ATCAT6, CAT6 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Mp5g21920.1 AAT1, CAT1 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Msp_g08387 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g18287 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g45054 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g53385 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Solyc02g070280.3.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.05 OrthoFinder output from all 47 species
Solyc08g077810.2.1 ATCAT6, CAT6,... Cationic amino acid transporter 6, chloroplastic... 0.06 OrthoFinder output from all 47 species
Spa_g05530 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Spa_g37070 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Tin_g12503 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005030_P001 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.07 OrthoFinder output from all 47 species
Zm00001e016491_P001 CAT5, Zm00001e016491 cationic amino acid transporter (CAT) 0.08 OrthoFinder output from all 47 species
Zm00001e030690_P001 CAT8, Zm00001e030690 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Zm00001e039396_P004 ATCAT6, CAT6,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 2 325
IPR029485 CAT_C 364 414
No external refs found!