Aliases : RPS1, ARRPS1, LOC_Os03g20100
Description : component psRPS1 of small ribosomal subunit proteome
Gene families : OG0002574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002574_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00212290 | RPS1, ARRPS1,... | Protein biosynthesis.organelle translation... | 0.07 | OrthoFinder output from all 47 species | |
AT5G30510 | RPS1, ARRPS1 | ribosomal protein S1 | 0.17 | OrthoFinder output from all 47 species | |
Adi_g033757 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Ala_g01963 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Als_g07823 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Als_g32395 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g17787 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g12017 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g41967 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene13361.t1 | RPS1, ARRPS1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene46819.t1 | RPS1, ARRPS1,... | component *(bS1c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0030.g024427 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Cba_g16776 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g16777 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.32G044800.1 | RPS1, ARRPS1,... | component *(bS1c) of small plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000241.13 | RPS1, ARRPS1 | Protein biosynthesis.organelle translation... | 0.07 | OrthoFinder output from all 47 species | |
Cre09.g394750 | RPS1, ARRPS1 | Protein biosynthesis.organelle translation... | 0.08 | OrthoFinder output from all 47 species | |
Dac_g12960 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g08135 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Dde_g07822 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g01340 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01034940001 | RPS1, ARRPS1 | Protein biosynthesis.organelle translation... | 0.16 | OrthoFinder output from all 47 species | |
Gb_02217 | RPS1, ARRPS1 | component psRPS1 of small ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
Len_g02246 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g03066 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
MA_694512g0010 | RPS1, ARRPS1 | 30S ribosomal protein S1, chloroplastic OS=Spinacia... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g22203 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g09544 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g07549 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g10266 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Pnu_g11886 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Pp3c10_21790V3.1 | RPS1, ARRPS1,... | ribosomal protein S1 | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g05695 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0074.g017184 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Sam_g07761 | No alias | component *(bS1c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g09837 | No alias | component *(bS1c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Smo271018 | RPS1, ARRPS1 | Protein biosynthesis.organelle translation... | 0.07 | OrthoFinder output from all 47 species | |
Solyc01g057830.3.1 | RPS1, ARRPS1,... | component psRPS1 of small ribosomal subunit proteome | 0.14 | OrthoFinder output from all 47 species | |
Spa_g01530 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g07743 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Tin_g04575 | RPS1, ARRPS1 | component *(bS1c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e038288_P002 | RPS1, ARRPS1,... | component psRPS1 of small ribosomal subunit proteome | 0.24 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003747 | translation release factor activity | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006415 | translational termination | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No external refs found! |