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  5. LOC_Os02g58580.1

LOC_Os02g58580.1 (LOC_Os02g58580)


Aliases : LOC_Os02g58580

Description : zinc cation transporter (Zn-CDF)


Gene families : OG0007732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g58580.1

Target Alias Description ECC score Gene Family Method Actions
Smo114043 No alias Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
Solyc03g063320.3.1 Solyc03g063320 zinc cation transporter (Zn-CDF) 0.03 OrthoFinder output from all 47 species
Spa_g07540 No alias zinc cation transporter *(Zn-CDF) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023513_P003 Zm00001e023513 zinc cation transporter (Zn-CDF) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0008324 monoatomic cation transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002524 Cation_efflux 73 196
No external refs found!