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  5. LOC_Os02g39970.1

LOC_Os02g39970.1 (LOC_Os02g39970)


Aliases : LOC_Os02g39970

Description : no hits & (original description: none)


Gene families : OG0003094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39970.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Als_g28490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017472001 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g26576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 476 535
IPR001611 Leu-rich_rpt 259 319
IPR001611 Leu-rich_rpt 381 400
IPR001611 Leu-rich_rpt 356 375
IPR001611 Leu-rich_rpt 332 346
IPR001611 Leu-rich_rpt 136 155
IPR001611 Leu-rich_rpt 403 424
IPR001611 Leu-rich_rpt 234 255
No external refs found!