1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g13970.2

LOC_Os02g13970.2 (LOC_Os02g13970)


Aliases : LOC_Os02g13970

Description : no hits & (original description: none)


Gene families : OG0003847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003847_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g13970.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00051210 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT4G18810 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g011016 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g10438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13897 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g21880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04590 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0183.g056499 No alias not classified & original description: CDS=145-1983 0.05 OrthoFinder output from all 47 species
Cba_g66634 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.95 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000492.83 No alias No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.7 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre01.g027850 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre05.g244800 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g15806 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g01471 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g11696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03794 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01021256001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_08986 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g10953 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g01848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10045090g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp3g10990.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11057 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g03597 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g07605 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pnu_g12441 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c26_9450V3.1 Pp3c26_9450 NAD(P)-binding Rossmann-fold superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g13881 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g07871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo170011 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g072160.4.1 Solyc02g072160 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g09147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28117 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e024909_P003 Zm00001e024909 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 120 235
IPR016040 NAD(P)-bd_dom 432 531
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 259 417
No external refs found!