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  5. LOC_Os02g13130.1

LOC_Os02g13130.1 (LOC_Os02g13130)


Aliases : LOC_Os02g13130

Description : no hits & (original description: none)


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g13130.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G25970 No alias KH domain-containing protein 0.03 OrthoFinder output from all 47 species
AT4G10070 No alias KH domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g013153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32757 No alias virus infection resistance factor *(BTR1) & original... 0.02 OrthoFinder output from all 47 species
Aob_g11832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g250800 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g11627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04922 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g24459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434164g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_13061g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g07780.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g20268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo437890 No alias Protein BTR1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g095960.3.1 Solyc12g095960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g39488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014452_P001 Zm00001e014452 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e021868_P005 Zm00001e021868 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029163_P001 Zm00001e029163 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 145 211
IPR004088 KH_dom_type_1 240 305
No external refs found!