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  5. LOC_Os01g74190.1

LOC_Os01g74190.1 (LOC_Os01g74190)


Aliases : LOC_Os01g74190

Description : no hits & (original description: none)


Gene families : OG0001131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g74190.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00171240 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G39670 No alias Radical SAM superfamily protein 0.06 OrthoFinder output from all 47 species
Aop_g12635 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0665.g081748 No alias RlmN-type rRNA methyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.08G040900.1 Ceric.08G040900 RlmN-type rRNA methyltransferase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.34G052300.1 Ceric.34G052300 RlmN-type rRNA methyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.127 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001527.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre02.g109250 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g01123 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10051 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04328 No alias RlmN-type rRNA methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016561001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01020239001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_41070 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g06989 No alias RlmN-type rRNA methyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
MA_952069g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g04510.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g12660.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g03954 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14699 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46988 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0197.g025527 No alias RlmN-type rRNA methyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g08674 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo85220 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc05g005590.4.1 Solyc05g005590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g030570.3.1 Solyc06g030570 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 145 312
No external refs found!