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  5. LOC_Os01g51220.1

LOC_Os01g51220.1 (LOC_Os01g51220)


Aliases : LOC_Os01g51220

Description : component TRS31 of TRAPP-I/II/III complex-shared components


Gene families : OG0006908 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006908_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g51220.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT5G58030 No alias Transport protein particle (TRAPP) component 0.11 OrthoFinder output from all 47 species
Adi_g015801 No alias component *(TRS31) of TRAPP-I/II/III complex-shared... 0.02 OrthoFinder output from all 47 species
Adi_g111229 No alias component *(TRS31) of TRAPP-I/II/III complex-shared... 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008579 No alias component *(TRS31) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Cba_g28442 No alias component *(TRS31) of TRAPP-I/II/III complex-shared... 0.02 OrthoFinder output from all 47 species
Ceric.04G021000.1 Ceric.04G021000 component *(TRS31) of TRAPP-I/II/III complex-shared... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.101 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.01 OrthoFinder output from all 47 species
Ehy_g00567 No alias component *(TRS31) of TRAPP-I/II/III complex-shared... 0.04 OrthoFinder output from all 47 species
Lfl_g00779 No alias component *(TRS31) of TRAPP-I/II/III complex-shared... 0.02 OrthoFinder output from all 47 species
Nbi_g04000 No alias component *(TRS31) of TRAPP-I/II/III complex-shared... 0.06 OrthoFinder output from all 47 species
Pir_g01225 No alias component *(TRS31) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009872 No alias component *(TRS31) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Zm00001e030059_P001 Zm00001e030059 component TRS31 of TRAPP-I/II/III complex-shared components 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007194 TRAPP_component 30 182
No external refs found!