LOC_Os01g47430.1 (LOC_Os01g47430)


Aliases : LOC_Os01g47430

Description : no hits & (original description: none)


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47430.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00072820 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G29350 No alias Kinase-related protein of unknown function (DUF1296) 0.03 OrthoFinder output from all 47 species
AT5G46380 No alias Kinase-related protein of unknown function (DUF1296) 0.03 OrthoFinder output from all 47 species
Adi_g008163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g129391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G004200.1 Ceric.27G004200 not classified & original description: pacid=50604818... 0.05 OrthoFinder output from all 47 species
Dac_g21669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014730001 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00263 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0094.g019136 No alias not classified & original description: CDS=121-1542 0.03 OrthoFinder output from all 47 species
Smo438753 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g018750.4.1 Solyc05g018750 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 23 81
No external refs found!