LOC_Os01g27750.1 (MEE32, EMB3004, LOC_Os01g27750)

Aliases : MEE32, EMB3004, LOC_Os01g27750

Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase

Gene families : OG0001444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001444_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g27750.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G06350	MEE32, EMB3004	dehydroquinate dehydratase, putative / shikimate...	0.04	OrthoFinder output from all 47 species
Adi_g014386	MEE32, EMB3004	3-dehydroquinate dehydratase and shikimate dehydrogenase...	0.03	OrthoFinder output from all 47 species
Ala_g28387	MEE32, EMB3004	3-dehydroquinate dehydratase and shikimate dehydrogenase...	0.02	OrthoFinder output from all 47 species
Cre08.g380201	MEE32, EMB3004	Amino acid metabolism.biosynthesis.shikimate...	0.01	OrthoFinder output from all 47 species
Gb_24244	MEE32, EMB3004	3-dehydroquinate dehydratase and shikimate dehydrogenase	0.04	OrthoFinder output from all 47 species
Len_g24227	MEE32, EMB3004	3-dehydroquinate dehydratase and shikimate dehydrogenase...	0.02	OrthoFinder output from all 47 species
Len_g48288	MEE32, EMB3004	3-dehydroquinate dehydratase and shikimate dehydrogenase...	0.03	OrthoFinder output from all 47 species
MA_10436080g0010	MEE32, EMB3004	3-dehydroquinate dehydratase and shikimate dehydrogenase	0.03	OrthoFinder output from all 47 species
Nbi_g05757	MEE32, EMB3004	3-dehydroquinate dehydratase and shikimate dehydrogenase...	0.02	OrthoFinder output from all 47 species
Ore_g28171	MEE32, EMB3004	3-dehydroquinate dehydratase and shikimate dehydrogenase...	0.03	OrthoFinder output from all 47 species
Pir_g03398	MEE32, EMB3004	3-dehydroquinate dehydratase and shikimate dehydrogenase...	0.02	OrthoFinder output from all 47 species
Sam_g07841	No alias	3-dehydroquinate dehydratase and shikimate dehydrogenase...	0.02	OrthoFinder output from all 47 species
Solyc01g067750.3.1	MEE32, EMB3004,...	3-dehydroquinate dehydratase and shikimate dehydrogenase	0.05	OrthoFinder output from all 47 species
Zm00001e017662_P001	MEE32, EMB3004,...	3-dehydroquinate dehydratase and shikimate dehydrogenase	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEA	Interproscan
MF	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004017	adenylate kinase activity	IEP	HCCA
MF	GO:0004312	fatty acid synthase activity	IEP	HCCA
MF	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity	IEP	HCCA
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	HCCA
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013708	Shikimate_DH-bd_N	236	316
IPR041121	SDH_C	475	504
IPR001381	DHquinase_I	5	222
IPR006151	Shikm_DH/Glu-tRNA_Rdtase	354	413

External Links

No external refs found!

LOC_Os01g27750.1 (MEE32, EMB3004, LOC_Os01g27750)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation