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  5. LOC_Os01g27380.1

LOC_Os01g27380.1 (GST2, ATPM24,...)


Aliases : GST2, ATPM24, ATGSTF2, ATPM24.1, GSTF2, LOC_Os01g27380

Description : Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica (sp|o65857|gstf1_orysj : 237.0)


Gene families : OG0000274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000274_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g27380.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G02920 GST11, ATGST11,... glutathione S-transferase 7 0.03 OrthoFinder output from all 47 species
AT1G02930 ERD11, ATGSTF6,... glutathione S-transferase 6 0.02 OrthoFinder output from all 47 species
AT2G30870 ATGSTF4, ERD13,... glutathione S-transferase PHI 10 0.03 OrthoFinder output from all 47 species
Aev_g11148 ATGSTF4, ERD13,... class phi glutathione S-transferase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02728 ATGSTF4, ERD13,... glutathione S-transferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30809 ATGSTF4, ERD13,... class phi glutathione S-transferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s3314.g115292 No alias not classified & original description: CDS=1-399 0.03 OrthoFinder output from all 47 species
Gb_06999 BAM1 glutathione S-transferase. class phi glutathione S-transferase 0.04 OrthoFinder output from all 47 species
LOC_Os05g05620.1 ATGSTF13, LOC_Os05g05620 class phi glutathione S-transferase 0.03 OrthoFinder output from all 47 species
LOC_Os08g43680.1 ATGSTF13, LOC_Os08g43680 class phi glutathione S-transferase 0.04 OrthoFinder output from all 47 species
Lfl_g24850 ATGSTF4, ERD13,... glutathione S-transferase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28706 GSTF8, ATGSTF8,... class phi glutathione S-transferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10142767g0010 GSTF9, ATGSTF7,... class phi glutathione S-transferase 0.03 OrthoFinder output from all 47 species
MA_10426249g0010 GSTF9, ATGSTF7,... Glutathione S-transferase F9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_5170784g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g02670.1 ATGSTF4, ERD13,... class phi glutathione S-transferase 0.03 OrthoFinder output from all 47 species
Mp2g18340.1 ATGSTF4, ERD13,... class phi glutathione S-transferase 0.02 OrthoFinder output from all 47 species
Mp7g00790.1 ATGSTF13 class phi glutathione S-transferase 0.03 OrthoFinder output from all 47 species
Mp7g13390.1 ERD11, ATGSTF6,... class phi glutathione S-transferase 0.05 OrthoFinder output from all 47 species
Ore_g10639 ATGSTF4, ERD13,... class phi glutathione S-transferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12104 ATGSTF4, ERD13,... class phi glutathione S-transferase & original description: none 0.02 OrthoFinder output from all 47 species
Smo142654 GSTF9, ATGSTF7,... Protein modification.S-glutathionylation and... 0.04 OrthoFinder output from all 47 species
Tin_g45907 GSTF9, ATGSTF7,... class phi glutathione S-transferase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000287_P001 ATGSTF13, Zm00001e000287 Glutathione S-transferase F11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e000288_P001 GSTF11, ATGSTF6,... class phi glutathione S-transferase 0.02 OrthoFinder output from all 47 species
Zm00001e028996_P001 ATGSTF13, Zm00001e028996 class phi glutathione S-transferase 0.03 OrthoFinder output from all 47 species
Zm00001e040423_P001 ATGSTF13, Zm00001e040423 class phi glutathione S-transferase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 3 66
IPR004046 GST_C 103 188
No external refs found!