LOC_Os01g03020.1 (EMB2369, LOC_Os01g03020)

Aliases : EMB2369, LOC_Os01g03020

Description : leucine-tRNA ligase

Gene families : OG0005525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005525_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g03020.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00043170	EMB2369,...	Leucine--tRNA ligase, chloroplastic/mitochondrial...	0.02	OrthoFinder output from all 47 species
AMTR_s00106p00046740	EMB2369,...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.05	OrthoFinder output from all 47 species
AT4G04350	EMB2369	tRNA synthetase class I (I, L, M and V) family protein	0.04	OrthoFinder output from all 47 species
Adi_g109524	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g11026	EMB2369	leucine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g03591	EMB2369	leucine-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene69869.t1	EMB2369, Aspi01Gene69869	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene69871.t1	EMB2369, Aspi01Gene69871	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000865.51	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.01	OrthoFinder output from all 47 species
Cre13.g578451	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
Dcu_g03124	EMB2369	leucine-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g07073	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01012668001	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
Gb_36904	EMB2369	leucine-tRNA ligase	0.05	OrthoFinder output from all 47 species
Lfl_g03404	EMB2369	leucine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g22600.1	EMB2369	leucine-tRNA ligase	0.07	OrthoFinder output from all 47 species
Msp_g18916	EMB2369	leucine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g15838	EMB2369	leucine-tRNA ligase & original description: none	0.08	OrthoFinder output from all 47 species
Pir_g15404	EMB2369	leucine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16597	No alias	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g080990.2.1	EMB2369, Solyc02g080990	leucine-tRNA ligase	0.07	OrthoFinder output from all 47 species
Zm00001e025691_P001	EMB2369, Zm00001e025691	leucine-tRNA ligase	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0002161	aminoacyl-tRNA editing activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002300	aa-tRNA-synth_Ia	710	740
IPR025709	Leu_tRNA-synth_edit	286	479
IPR015413	Methionyl/Leucyl_tRNA_Synth	106	237
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	796	903

External Links

No external refs found!

LOC_Os01g03020.1 (EMB2369, LOC_Os01g03020)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation