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  5. MA_88625g0010

MA_88625g0010 (XPO1A, HIT2, ATCRM1,...)


Aliases : XPO1A, HIT2, ATCRM1, XPO1, ATXPO1

Description : XPO1 nucleocytoplasmic export karyopherin


Gene families : OG0003383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_88625g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00152740 XPO1A, HIT2,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Adi_g018503 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.05 OrthoFinder output from all 47 species
Aev_g14729 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.03 OrthoFinder output from all 47 species
Aev_g46968 XPO1A, HIT2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06015 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.04 OrthoFinder output from all 47 species
Aop_g01399 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g14398 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g13815 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.02 OrthoFinder output from all 47 species
Dde_g02403 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01024418001 XPO1A, HIT2,... Protein translocation.nucleus.nucleocytoplasmic... 0.07 OrthoFinder output from all 47 species
Gb_26953 XPO1A, HIT2,... XPO1 nucleocytoplasmic export karyopherin 0.06 OrthoFinder output from all 47 species
Len_g01916 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g07837 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g25272 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g11402 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03977 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019664 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g40917 No alias nucleocytoplasmic export karyopherin *(XPO1) & original... 0.02 OrthoFinder output from all 47 species
Smo233936 XPO1A, HIT2,... Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Solyc03g096920.3.1 XPO1A, HIT2,... XPO1 nucleocytoplasmic export karyopherin 0.09 OrthoFinder output from all 47 species
Tin_g03542 XPO1A, HIT2,... nucleocytoplasmic export karyopherin *(XPO1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e006430_P001 XPO1A, HIT2,... XPO1 nucleocytoplasmic export karyopherin 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR014877 XPO1_C_dom 144 466
No external refs found!