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  5. MA_541749g0010

MA_541749g0010


Description : G2-like GARP transcription factor


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_541749g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G13300 HRS1 myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT3G25790 No alias myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
Aev_g37049 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_58982g0010 ATCAD9, CAD9 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Nbi_g30226 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g05162 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g29341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo402040 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Tin_g11367 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003080_P001 Zm00001e003080 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!