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  5. MA_306852g0010

MA_306852g0010 (UBC18)


Aliases : UBC18

Description : Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana (sp|q9fwt2|ubc16_arath : 171.0)


Gene families : OG0001468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_306852g0010
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
Adi_g050336 UBC16 E2 ubiquitin-conjugating enzyme *(UBC15) & original... 0.02 OrthoFinder output from all 47 species
Dde_g09771 UBC16 E2 ubiquitin-conjugating enzyme *(UBC15) & original... 0.02 OrthoFinder output from all 47 species
Dde_g21966 UBC16 E2 ubiquitin-conjugating enzyme *(UBC15) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004782 UBC16 not classified & original description: CDS=1-837 0.03 OrthoFinder output from all 47 species
Solyc04g080810.4.1 UBC16, Solyc04g080810 Probable ubiquitin-conjugating enzyme E2 16... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 24 107
No external refs found!