1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_291146g0010

MA_291146g0010


Description : DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana (sp|f4i9q5|dexh7_arath : 353.0)


Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_291146g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G58060 No alias RNA helicase family protein 0.02 OrthoFinder output from all 47 species
AT2G01130 No alias DEA(D/H)-box RNA helicase family protein 0.03 OrthoFinder output from all 47 species
Adi_g057149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0037.g025865 No alias not classified & original description: CDS=97-4182 0.03 OrthoFinder output from all 47 species
Ceric.20G077000.1 Ceric.20G077000 not classified & original description: pacid=50565979... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000786.1 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre06.g266416 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ehy_g15250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05411 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os04g35260.1 LOC_Os04g35260 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.02 OrthoFinder output from all 47 species
Len_g41812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g09990.1 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.06 OrthoFinder output from all 47 species
Ore_g44903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo173775 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo177444 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc01g103690.4.1 Solyc01g103690 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.05 OrthoFinder output from all 47 species
Spa_g26916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 67 198
No external refs found!