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  5. MA_152325g0010

MA_152325g0010 (KS, KS1, ATKS1, ATKS, GA2)


Aliases : KS, KS1, ATKS1, ATKS, GA2

Description : Alpha-bisabolene synthase OS=Abies grandis (sp|o81086|tpsd1_abigr : 226.0)


Gene families : OG0006488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_152325g0010
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Dac_g21648 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29134 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006487001 TPS04, TPS4, GES S-linalool synthase OS=Clarkia breweri 0.02 OrthoFinder output from all 47 species
Gb_05029 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Gb_10756 No alias Bifunctional levopimaradiene synthase, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_12468 TPS02 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_13713 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
Gb_17366 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
Gb_17941 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
Gb_36202 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.01 OrthoFinder output from all 47 species
Gb_39616 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
LOC_Os12g30800.1 KS, KS1, ATKS1,... Ent-sandaracopimara-8(14),15-diene synthase OS=Oryza... 0.04 OrthoFinder output from all 47 species
Len_g37092 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_176370g0020 No alias Bifunctional isopimaradiene synthase, chloroplastic... 0.04 OrthoFinder output from all 47 species
Ore_g31705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34951 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03163 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19537 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g005635.1.1 KS, KS1, ATKS1,... Beta-phellandrene synthase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!