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  5. MA_12784g0010

MA_12784g0010 (ATTCP24, TCP24)


Aliases : ATTCP24, TCP24

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_12784g0010
Cluster HCCA: Cluster_461

Target Alias Description ECC score Gene Family Method Actions
Ala_g18903 TCP3 TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene27741.t1 TCP2, Aspi01Gene27741 TCP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene62817.t1 TCP2, Aspi01Gene62817 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G025200.1 ATTCP24, TCP24,... TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01021528001 ATTCP24, TCP24 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
Gb_30049 TCP2 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Gb_35810 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Gb_38376 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Gb_38379 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_75780g0010 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_86651g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g48155 TCP3 TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e005407_P001 TCP12, BRC2,... transcription factor (TCP) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 30 178
No external refs found!