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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_12784g0010 (TCP24) | - | -2.05 | - | - | - | - | - | - | - | - | - | - | -1.61 | - | - | - | - | - | - | - | -1.85 | -0.86 | 0.15 | - | - | -0.95 | - | - | - | - | 1.83 | 1.5 | 2.73 | 3.49 | 2.79 | 1.92 | 2.33 | 1.19 | 1.09 | 0.74 | -0.11 | 1.74 | - | -3.46 | - | 1.29 | - | -4.32 | -4.47 | - | - | - | - | - | - | - |
MA_161426g0010 (WRKY47) | - | - | - | - | -6.63 | - | - | - | -8.98 | - | - | -5.61 | - | - | - | - | - | - | - | -0.57 | - | - | - | -4.54 | 0.54 | -1.21 | 0.71 | 0.48 | 0.3 | 0.81 | 2.11 | 1.46 | 2.2 | 2.91 | 2.65 | 2.17 | 1.28 | 1.64 | 1.66 | 1.52 | 1.21 | 1.28 | - | - | - | - | - | -0.69 | -1.0 | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.82 | - | - | - | - | - | - | -0.83 | - | 1.69 | - | 0.06 | 2.01 | 2.28 | 2.56 | 3.46 | 2.4 | 2.88 | - | 1.57 | 1.58 | 0.69 | 1.14 | 1.49 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_46529g0010 (WRKY6) | -1.32 | - | - | - | -3.62 | - | - | -4.55 | -2.22 | -3.11 | - | - | -4.33 | - | - | - | - | - | -1.21 | - | -3.54 | - | - | - | -1.39 | -1.95 | -0.75 | - | - | -3.7 | 1.12 | 1.42 | 2.81 | 3.54 | 2.91 | 1.41 | 1.04 | 1.69 | 1.8 | 2.03 | 1.23 | 1.63 | - | - | - | -2.83 | -3.46 | -1.67 | -0.63 | -4.62 | - | - | - | - | - | -5.13 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.32 | - | - | - | - | - | -1.8 | 1.49 | - | -1.33 | - | 2.39 | 1.77 | 2.44 | 2.63 | 2.99 | 2.49 | 1.09 | 2.03 | 2.36 | 1.27 | 0.62 | 0.87 | - | - | - | - | - | -0.64 | -0.53 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | -1.08 | - | - | - | - | -1.5 | - | - | - | - | - | - | -2.26 | - | - | - | - | 2.0 | 2.06 | 2.81 | 3.06 | 3.11 | 1.95 | 2.16 | 1.77 | 1.48 | 0.96 | 1.01 | 1.56 | - | - | - | - | - | -3.19 | -3.3 | - | - | - | 0.23 | - | - | - | |
MA_93117g0010 (TCP24) | - | -1.84 | - | - | - | - | - | - | - | - | - | - | -2.4 | - | - | - | - | - | - | - | - | -1.07 | - | - | - | 0.55 | - | - | - | - | 2.5 | 2.57 | 2.48 | 2.58 | 2.16 | 1.82 | 3.16 | 1.14 | 1.78 | 1.04 | 1.9 | 0.45 | -2.84 | -3.67 | -2.69 | - | - | -2.0 | -3.79 | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.