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  5. MA_126258g0010

MA_126258g0010


Description : C3H zinc finger transcription factor


Gene families : OG0001347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_126258g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g054649 ZFWD1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aev_g01394 ZFWD1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29403.t1 Aspi01Gene29403 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17439 ZFWD1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cre12.g510150 No alias Zinc finger CCCH domain-containing protein 48... 0.03 OrthoFinder output from all 47 species
LOC_Os02g45480.1 ZFWD1, LOC_Os02g45480 C3H zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Nbi_g06209 ZFWD1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ore_g20246 ZFWD1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g30049 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Tin_g02746 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Zm00001e015432_P003 ZFWD1, Zm00001e015432 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 138 173
IPR001680 WD40_repeat 261 293
IPR001680 WD40_repeat 298 332
IPR000571 Znf_CCCH 108 128
No external refs found!