Aliases : MRL1
Description : Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana (sp|q0wlc6|pp349_arath : 162.0)
Gene families : OG0004421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004421_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_122602g0010 | |
Cluster | HCCA: Cluster_128 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00357p00011320 | MRL1,... | No description available | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00451p00003410 | MRL1,... | Pentatricopeptide repeat-containing protein MRL1,... | 0.04 | OrthoFinder output from all 47 species | |
AT4G34830 | MRL1 | Pentatricopeptide repeat (PPR) superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
Aev_g07991 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Ala_g16036 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Als_g02579 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g03622 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aop_g11874 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene25377.t1 | MRL1, Aspi01Gene25377 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g02698 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.28G061200.1 | Ceric.28G061200 | rbcL-mRNA stability factor *(MRL1) & original... | 0.07 | OrthoFinder output from all 47 species | |
Dac_g12659 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g03176 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g10337 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024119001 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_33501 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os10g10170.1 | MRL1, LOC_Os10g10170 | Pentatricopeptide repeat-containing protein MRL1,... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g02395 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Mp3g17160.1 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g25355 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g03133 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g08612 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pir_g17500 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g08167 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0008.g003951 | No alias | rbcL-mRNA stability factor *(MRL1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g12546 | No alias | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo115078 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.03 | OrthoFinder output from all 47 species | |
Smo169254 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g111020.3.1 | MRL1, Solyc01g111020 | Pentatricopeptide repeat-containing protein MRL1,... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g01352 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g02143 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e002719_P003 | MRL1, Zm00001e002719 | Pentatricopeptide repeat-containing protein MRL1,... | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | HCCA |
BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | HCCA |
BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | HCCA |
BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | HCCA |
MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |