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  5. MA_119122g0010

MA_119122g0010 (PBD2)


Aliases : PBD2

Description : Proteasome subunit beta type-2-B OS=Arabidopsis thaliana (sp|o24633|psb2b_arath : 178.0)


Gene families : OG0004283 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_119122g0010
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272080 PRCGB, PBD1,... Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
AT4G14800 PBD2 20S proteasome beta subunit D2 0.05 OrthoFinder output from all 47 species
Adi_g008050 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aev_g00486 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Ala_g09690 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g00205 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cba_g00483 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.27G023100.1 PRCGB, PBD1,... beta-type-4 component *(PBD) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.80 PRCGB, PBD1 Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
Cre14.g610950 PRCGB, PBD1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Dac_g04914 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dcu_g08528 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Dde_g00381 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ehy_g02054 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
GSVIVT01001182001 PRCGB, PBD1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Gb_19481 PRCGB, PBD1 Proteasome subunit beta type-2-A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g48930.1 PRCGB, PBD1,... component beta type-4 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Len_g12839 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Mp4g04320.1 PRCGB, PBD1 component beta type-4 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Msp_g00339 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Solyc09g082320.3.1 PRCGB, PBD1,... component beta type-4 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Spa_g25247 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Spa_g46825 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Tin_g04912 PRCGB, PBD1 beta-type-4 component *(PBD) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e012245_P001 PRCGB, PBD1,... component beta type-4 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004140 dephospho-CoA kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 2 90
No external refs found!