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Description : 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica (sp|p49199|rs8_orysj : 107.0)
Gene families : OG0000906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000906_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10436736g0010 | |
| Cluster | HCCA: Cluster_162 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00109p00031400 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G20290 | No alias | Ribosomal protein S8e family protein | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g00910 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g34365 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07667 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11567 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23945 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g32909 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G124400.1 | Ceric.01G124400 | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G096700.1 | Ceric.12G096700 | component *(eS8) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cre06.g272800 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g03069 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21450 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037763001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_28325 | No alias | component RPS8 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g28810.1 | LOC_Os02g28810 | 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g28180.1 | LOC_Os04g28180 | component RPS8 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| MA_4907g0010 | No alias | 40S ribosomal protein S8 OS=Prunus armeniaca... | 0.04 | OrthoFinder output from all 47 species | |
| Mp2g16300.1 | No alias | component RPS8 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g18199 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02405 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02421 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c12_18260V3.1 | Pp3c12_18260 | Ribosomal protein S8e family protein | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c13_20020V3.1 | Pp3c13_20020 | Ribosomal protein S8e family protein | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c19_6490V3.1 | Pp3c19_6490 | Ribosomal protein S8e family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_11370V3.1 | Pp3c4_11370 | Ribosomal protein S8e family protein | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0161.g023905 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27314 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g083180.4.1 | Solyc06g083180 | component RPS8 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g057650.3.1 | Solyc09g057650 | component RPS8 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g006070.3.1 | Solyc10g006070 | component RPS8 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25236 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09569 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024995_P001 | Zm00001e024995 | component RPS8 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e024996_P001 | Zm00001e024996 | component RPS8 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e024999_P001 | Zm00001e024999 | component RPS8 of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006528 | asparagine metabolic process | IEP | HCCA |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022309 | Ribosomal_S8e/biogenesis_NSA2 | 38 | 90 |
| No external refs found! |