MA_10436167g0010 (PAD1)

Aliases : PAD1

Description : component alpha type-4 of 26S proteasome

Gene families : OG0004574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004574_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10436167g0010
Cluster	HCCA: Cluster_256

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00097510	PAD2,...	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
AT3G51260	PAD1	20S proteasome alpha subunit PAD1	0.12	OrthoFinder output from all 47 species
Ala_g11990	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Aop_g05904	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.05	OrthoFinder output from all 47 species
Azfi_s0460.g072060	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Cba_g10125	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020830.84	PAD2	Protein degradation.26S proteasome.20S core...	0.04	OrthoFinder output from all 47 species
Cre01.g030850	PAD1	Protein degradation.26S proteasome.20S core...	0.08	OrthoFinder output from all 47 species
Dac_g44785	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Dcu_g02688	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Dde_g10478	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.06	OrthoFinder output from all 47 species
GSVIVT01024037001	PAD2	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Gb_06267	PAD2	component alpha type-4 of 26S proteasome	0.06	OrthoFinder output from all 47 species
LOC_Os08g43540.1	PAD2, LOC_Os08g43540	component alpha type-4 of 26S proteasome	0.02	OrthoFinder output from all 47 species
LOC_Os09g36710.1	PAD2, LOC_Os09g36710	component alpha type-4 of 26S proteasome	0.06	OrthoFinder output from all 47 species
Mp6g07820.1	PAD2	component alpha type-4 of 26S proteasome	0.08	OrthoFinder output from all 47 species
Msp_g00381	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.05	OrthoFinder output from all 47 species
Nbi_g00471	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.05	OrthoFinder output from all 47 species
Ore_g07888	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Solyc01g111450.3.1	PAD2, Solyc01g111450	component alpha type-4 of 26S proteasome	0.11	OrthoFinder output from all 47 species
Spa_g30453	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Spa_g39445	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Tin_g05476	PAD2	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Zm00001e010250_P002	PAD2, Zm00001e010250	component alpha type-4 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Zm00001e035996_P001	PAD2, Zm00001e035996	component alpha type-4 of 26S proteasome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	IEA	Interproscan
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEA	Interproscan
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	27	198
IPR000426	Proteasome_asu_N	4	26

External Links

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MA_10436167g0010 (PAD1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation