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Aliases : ATCPSF160, CPSF160
Description : Cleavage and polyadenylation specificity factor subunit 1 OS=Arabidopsis thaliana (sp|q9fgr0|cpsf1_arath : 291.0)
Gene families : OG0003336 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003336_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00037520 | ATCPSF160,... | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.05 | OrthoFinder output from all 47 species | |
| AT5G51660 | ATCPSF160, CPSF160 | cleavage and polyadenylation specificity factor 160 | 0.04 | OrthoFinder output from all 47 species | |
| Als_g01205 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06976 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G035200.1 | ATCPSF160,... | component *(CPSF160/Yhh1) of Cleavage and... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g15463 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018506001 | ATCPSF160, CPSF160 | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25538 | ATCPSF160, CPSF160 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25540 | ATCPSF160, CPSF160 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25541 | ATCPSF160, CPSF160 | Cleavage and polyadenylation specificity factor subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g06583 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12638 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
| Smo82277 | ATCPSF160, CPSF160 | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc03g007100.3.1 | ATCPSF160,... | component CPSF160/Yhh1 of Cleavage and Polyadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g41718 | ATCPSF160, CPSF160 | component *(CPSF160/Yhh1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008515_P003 | ATCPSF160,... | component CPSF160/Yhh1 of Cleavage and Polyadenylation... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |