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  5. MA_10431457g0010

MA_10431457g0010


Description : component psRPL29 of large ribosomal subunit proteome


Gene families : OG0004758 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004758_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431457g0010
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00170150 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT5G65220 No alias Ribosomal L29 family protein 0.13 OrthoFinder output from all 47 species
Aev_g03513 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g00554 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Als_g34521 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aob_g00731 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aop_g32624 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Azfi_s0048.g030677 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g00374 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.34G037300.1 Ceric.34G037300 component *(uL29c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Cre06.g259850 No alias No description available 0.09 OrthoFinder output from all 47 species
Dac_g03965 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dcu_g13501 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ehy_g20187 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
LOC_Os02g51790.1 LOC_Os02g51790 component psRPL29 of large ribosomal subunit proteome 0.13 OrthoFinder output from all 47 species
Len_g45621 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g16498 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Mp4g10390.1 No alias component psRPL29 of large ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
Msp_g08238 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Nbi_g13470 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ore_g04033 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Pir_g11029 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c15_20650V3.1 Pp3c15_20650 Ribosomal L29 family protein 0.03 OrthoFinder output from all 47 species
Pp3c9_19800V3.1 Pp3c9_19800 Ribosomal L29 family protein 0.03 OrthoFinder output from all 47 species
Ppi_g10973 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008714 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Sam_g12929 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Sam_g12930 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc06g072470.4.1 Solyc06g072470 component psRPL29 of large ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
Spa_g03535 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Spa_g13994 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Tin_g03662 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e023859_P001 Zm00001e023859 component psRPL29 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 67 122
No external refs found!