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  5. MA_10427944g0010

MA_10427944g0010 (SPD1)


Aliases : SPD1

Description : no hits & (original description: none)


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427944g0010
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00151130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g108757 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12619 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02605 SPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g07290 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g18245 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03538 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g15547 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035628 SPD1 not classified & original description: CDS=106-2181 0.04 OrthoFinder output from all 47 species
Cba_g18558 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G016100.1 Ceric.08G016100 not classified & original description: pacid=50637973... 0.05 OrthoFinder output from all 47 species
Ceric.34G074300.1 SPD1, Ceric.34G074300 not classified & original description: pacid=50622982... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.19 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g01740 SPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05731 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11178 SPD1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g02694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18471 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016194001 SPD1 No description available 0.01 OrthoFinder output from all 47 species
Gb_10727 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06190.1 LOC_Os06g06190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g08970.1 SPD1, LOC_Os07g08970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g10640.1 LOC_Os12g10640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g22990.1 SPD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g21651 SPD1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g08814 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08230 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48536 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo410877 SPD1 No description available 0.02 OrthoFinder output from all 47 species
Solyc12g014150.3.1 Solyc12g014150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g26580 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000530_P004 Zm00001e000530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030045_P004 Zm00001e030045 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 109 194
No external refs found!