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  5. Pp3c2_31480V3.1

Pp3c2_31480V3.1 (Pp3c2_31480)


Aliases : Pp3c2_31480

Description : Signal peptidase subunit


Gene families : OG0003386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_31480V3.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT3G05230 No alias Signal peptidase subunit 0.02 OrthoFinder output from all 47 species
Aop_g35395 No alias component *(SPCs3) of SPC endoplasmic signal peptidase... 0.01 OrthoFinder output from all 47 species
Azfi_s0265.g060953 No alias component *(SPCs3) of SPC endoplasmic signal peptidase... 0.02 OrthoFinder output from all 47 species
Cre14.g620400 No alias Protein modification.peptide maturation.endomembrane... 0.03 OrthoFinder output from all 47 species
GSVIVT01000024001 No alias Protein modification.peptide maturation.endomembrane... 0.02 OrthoFinder output from all 47 species
Gb_35804 No alias component SPCs3 of SPC endoplasmic signal peptidase complex 0.05 OrthoFinder output from all 47 species
LOC_Os01g04030.1 LOC_Os01g04030 component SPCs3 of SPC endoplasmic signal peptidase complex 0.02 OrthoFinder output from all 47 species
MA_206103g0010 No alias component SPCs3 of SPC endoplasmic signal peptidase complex 0.01 OrthoFinder output from all 47 species
Smo151128 No alias Protein modification.peptide maturation.endomembrane... 0.01 OrthoFinder output from all 47 species
Solyc01g098780.3.1 Solyc01g098780 component SPCs3 of SPC endoplasmic signal peptidase complex 0.03 OrthoFinder output from all 47 species
Spa_g08034 No alias component *(SPCs3) of SPC endoplasmic signal peptidase... 0.04 OrthoFinder output from all 47 species
Tin_g21481 No alias component *(SPCs3) of SPC endoplasmic signal peptidase... 0.02 OrthoFinder output from all 47 species
Zm00001e034896_P001 Zm00001e034896 component SPCs3 of SPC endoplasmic signal peptidase complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEA Interproscan
BP GO:0006465 signal peptide processing IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007653 SPC3 4 174
No external refs found!