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  5. Pp3c24_2030V3.1

Pp3c24_2030V3.1 (CAM3, acam-3, Pp3c24_2030)


Aliases : CAM3, acam-3, Pp3c24_2030

Description : calmodulin 5


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_2030V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00073390 CAM3, acam-3,... Calmodulin OS=Solanum lycopersicum 0.01 OrthoFinder output from all 47 species
AT2G27030 ACAM-2, CAM5 calmodulin 5 0.01 OrthoFinder output from all 47 species
AT5G21274 ACAM-6, CAM6 calmodulin 6 0.01 OrthoFinder output from all 47 species
Ala_g05659 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g05645 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36845 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24167.t1 CAM3, acam-3,... calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08304 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.35 No alias Calmodulin-like protein 1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cre03.g150300 ACAM-6, CAM6 Calmodulin-3 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
LOC_Os03g20370.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.01 OrthoFinder output from all 47 species
Msp_g03033 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g06055 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g26354 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e027331_P001 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 73
IPR002048 EF_hand_dom 83 146
No external refs found!