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  5. Pp3c13_5310V3.1

Pp3c13_5310V3.1 (Pp3c13_5310)


Aliases : Pp3c13_5310

Description : Histone superfamily protein


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_5310V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g006378 No alias histone *(H4) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.33G046700.1 Ceric.33G046700 histone *(H4) & original description: pacid=50606609... 0.01 OrthoFinder output from all 47 species
Gb_15458 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Mp5g22460.1 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Mp5g22470.1 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Sam_g06107 No alias histone *(H4) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!