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  5. Pp3c13_21440V3.1

Pp3c13_21440V3.1 (Pp3c13_21440)


Aliases : Pp3c13_21440

Description : alpha/beta-Hydrolases superfamily protein


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_21440V3.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Als_g05557 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g20900 CXE17, AtCXE17 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40337.t1 CXE17, AtCXE17,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.9 ATGID1A, GID1A Probable carboxylesterase 17 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g51079 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g47130 CXE20, AtCXE20 not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os11g13670.1 AtCXE18, CXE18,... Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_170302g0010 No alias Probable carboxylesterase 6 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g10782 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g11993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12412 CXE17, AtCXE17 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25180 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29150 CXE20, AtCXE20 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g34301 ATGID1C, GID1C not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022408 AtCXE18, CXE18 not classified & original description: CDS=1-1098 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0304.g027211 CXE20, AtCXE20 not classified & original description: CDS=1-1026 0.02 OrthoFinder output from all 47 species
Solyc01g098390.3.1 ATGID1C, GID1C,... GID1-type gibberellin receptor 0.01 OrthoFinder output from all 47 species
Spa_g13456 CXE17, AtCXE17 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 81 288
No external refs found!