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  5. Pp3c11_17980V3.1

Pp3c11_17980V3.1 (ATCEL2, CEL2, Pp3c11_17980)


Aliases : ATCEL2, CEL2, Pp3c11_17980

Description : cellulase 2


Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_17980V3.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00146230 AtGH9B9, GH9B9,... Endoglucanase 2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT4G39000 GH9B17, AtGH9B17 glycosyl hydrolase 9B17 0.01 OrthoFinder output from all 47 species
Aspi01Gene69644.t1 AtGH9A4, GH9A4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71907.t1 AtGH9C3, GH9C3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s1974.g108478 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01037210001 CEL5, ATGH9B4, ATCEL5 Cell wall.cellulose.degradation.endo-1,4-beta-glucanase 0.01 OrthoFinder output from all 47 species
Gb_34874 AtGH9B13, GH9B13 Endoglucanase 17 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_40488 ATCEL2, CEL2 Endoglucanase 1 OS=Persea americana... 0.01 OrthoFinder output from all 47 species
Len_g40352 AtGH9B8, GH9B8 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10430095g0010 CEL1, GH9B1, ATGH9B1 Endoglucanase OS=Phaseolus vulgaris (sp|p22503|gun_phavu : 316.0) 0.02 OrthoFinder output from all 47 species
MA_140507g0010 CEL1, GH9B1, ATGH9B1 Endoglucanase 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_14604g0010 AtGH9B13, GH9B13 Endoglucanase 17 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_20530g0010 AtGH9C3, GH9C3 Endoglucanase 19 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_74652g0010 CEL1, GH9B1, ATGH9B1 Endoglucanase 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_76986g0010 AtGH9B13, GH9B13 Endoglucanase 17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041926_P001 AtGH9C1, GH9C1,... Endoglucanase 13 OS=Oryza sativa subsp. indica... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 32 488
No external refs found!