Pp3c11_14630V3.1 (RPS17, CS17, PRPS17,...)


Aliases : RPS17, CS17, PRPS17, Pp3c11_14630

Description : ribosomal protein S17


Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_14630V3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G79850 RPS17, CS17, PRPS17 ribosomal protein S17 0.06 OrthoFinder output from all 47 species
Adi_g012725 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ala_g13255 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Als_g47206 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aop_g43549 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aspi01Gene13972.t1 RPS17, CS17,... component *(uS17c) of small plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Cba_g10962 emb1129 component *(uS17m) of small mitoribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Ceric.11G069100.1 Ceric.11G069100 component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cre02.g118950 emb1129 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dac_g17145 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g25473 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g07306 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
GSVIVT01017072001 RPS17, CS17, PRPS17 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Gb_07769 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
MA_10123473g0010 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp2g19130.1 No alias component mtRPS17 of small ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
Msp_g12962 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Nbi_g24135 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Nbi_g38729 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g06145 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c1_12860V3.1 RPS17, CS17,... ribosomal protein S17 0.03 OrthoFinder output from all 47 species
Ppi_g20252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019876 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc03g120630.4.1 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Spa_g48114 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Tin_g09281 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Zm00001e028738_P001 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 54 121
No external refs found!